Essential Bioinformatics and Biocomputing
2002/03-Semester 2
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LSM2104 Practicals Essential Bioinformatics and Biocomputing 2002/03-Semester 2 |
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1.I would like to thank to:Assoc Professor Tan Tin Wee, Dept. of Biochemistry,
NUS my TA.s : Justin Choo, NUSIBILL 1, Dept. of Biochemistry, NUS Bhuvana, NUSIBILL 1, Dept. of Biochemistry, NUS and to
all of my group mates and friends for all the guidance and helps to complete this project.
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| Adia pranatalia Lim sci11095@nus.edu.sg |
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2. I would like to thank A/P Tan Tin Wee, Choo Khar Heng and Narasa Ramaswamy Bhuvaneswari for
their time, patience and dedication spent on helping me in this project.
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| Bahety Priyanka sci10419@nus.edu.sg |
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3.I would like to thank A/P Tan Tin Wee and TA's Chen Xin and Kong Lesheng for their
interesting idea on opening this mini project and all their kind helps.
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| Bui Thai Hoang Thu sci11192@nus.edu.sg |
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4.The author wishes to thank A/P Tan Tin Wee (LSM2104 Lecturer), Justin Choo and Buvana (Group
A Teaching Assistants), Samuel Chiang, Lin Yangchen, Shruti Kapoor, Kuah Li Fang, Innocentia MK, Lim Kim Yong, Huegesh
Marimuthu, Xie Huangming, Darwin Gosal, Chang Kelken and friends
for excellent advice, encouragement and help.
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| Chak Li Ling sci11262@nus.edu.sg |
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5.I would like to thank all those who have helped me to complete this project: Assoc Professor
Tan Tin Wee whose explainations allow me yo understand the project better, Justin Choo and Bhuvana for being responsible
and very patient
TAs as they taught me how to go about doing this project.
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| Chan Qing Li (Zeng Qingli) sci10381@nus.edu.sg |
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6.I would like to thank to: Assoc Professor Tan Tin Wee, Dept. of Biochemistry, NUS my TA.s :
Justin Choo, NUSIBILL 1, Dept. of Biochemistry, NUS
Bhuvana, NUSIBILL 1, Dept. of Biochemistry, NUS and to all of my group mates and friends
for all the guidance and helps to complete this project.
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| Deborah Chandra sci11228@nus.edu.sg |
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7.I would like to thank the following: 1.Assoc Professor Tan Tin Wee, Dept. of Biochemistry,
NUS
2.Teaching Assistant's: Justin Choo, NUSIBILL 1, Dept. ofBiochemistry, NUS and Bhuvana,NUSIBILL 1, Dept. of Biochemistry, NUS and to all those who have contributed and have given suggestions to make this project possible.
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| Chang Chi-yao, Benjamin sci10112@nus.edu.sg |
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8.I would like to thank Justin and Bhuvana for their
patient guidance throughout the course of this mini project
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| Chen Wanying sci10617@nus.edu.sg |
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9.I suppose at the end of it all , I find myself asking myself what have I learnt ? In my
opinion , the most important lesson would be that you don't ever give up . Many times I have encountered dead ends and
false leads when searching through the various databases . Sometimes a brilliant idea or avenue to search for would
falter and fizzle out . But interestingly , I always found myself thinking of new ways and means to work around the
stoppages even when I am not working on the mini-project . I would spend the entire day pondering over perhaps a
different approach or perhaps an alternative keyword search . And that to me , is the hallmark of an interesting and
captivating project . All that and the realization that there is a wealth of information at my fingertips . The
databases contain information on just about anything and their exponential growth , day by day is staggeringly amazing
when you think about it . But such huge databases come with a price , one can easily get lost within if searching
without point or direction . I guess this project has given me a lot of practice at handling the databases , what they
do , which to go to when I want certain information . And lastly , a lot of thank yous go out to everyone who has helped
me in this project . The TAs who didn't mind our endless and inane questions and even my other classmates who loaned me
books or gave me advice when I was stuck
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| Chin Kwong Cheong sci11292@nus.edu.sg |
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10.I would like to thank my TA Justin who helped me along when i encountered problems with the project |
| Chong Ruiling sci10401@nus.edu.sg sci10401@nus.edu.sg |
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11.I would sincerely like to thank A/P Tan Tin Wee for his time and kind explanation that had enlightened me on various aspects of this project, as well as Mr Justine for being a patient and responsible TA. |
| Chong Shimin Desiree sci10774@nus.edu.sg sci10774@nus.edu.sg |
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12.I would sincerely like to thank A/P Tan Tin Wee for his time and kind explanation that had enlightened me on various aspects of this project.i would also like to thank my TA, Justin for being a patient and responsible TA. |
| CHUA CHER LING sci10524@nus.edu.sg sci10524@nus.edu.sg |
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13.I would thank both my TAs in group B for their patience and guidance during the practical sessions |
| Ee Hui Jing sci10867@nus.edu.sg sci10867@nus.edu.sg |
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14.Lastly, a big thanks to the TAs for helping me out in this project. |
| Fong Eng Kiat sci10927@nus.edu.sg sci10927@nus.edu.sg |
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15.Special thanks to everyone who had helped me in one way or another! |
| Guan Xue Li sci10572@nus.edu.sg sci10572@nus.edu.sg |
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16.A big THANK YOU to my tutors, Mr. Chen Xin and Mr. Kong Le Sheng for their valuable advice and for answering so many of my queries, for their valuable advice and for answering so many of my queries, for their valuable advice and for answering so many of |
| Eng Goi Hui sci10747@nus.edu.sg sci10747@nus.edu.sg |
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17.My warmest thanks goes to my TAs, whose precious help was very much appreciated and whose guidance made a big difference, and to A/P Tan Tin Wee for making this whole project seem more appealing by his warm nature in explaining. |
| Melissa Grace HAN HUNG PEW sci11148@nus.edu.sg sci11148@nus.edu.sg |
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18.I would like to most sincerely thank my TA, Chen Xin, for his understanding and patient explanations, and Dr Tan for his enthusiasm in teaching, and also for his patience. |
| Heng Kenhui sci10634@nus.edu.sg sci10634@nus.edu.sg |
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19.I would like to thank A/P Tan Tin Wee for his time and kind explanation that had enlightened me on various aspects of this project during lectures, as well as Mr Chen Xin and Mr Kong Lesheng for being responsible TAs and patient with all the questions that I ask during tutorial and practical sessions. I would also like to thank my friends who helped me with some problems I had encountered during the process of creating this website. |
| Huang Jinjin,Kim sci10874@nus.edu.sg sci10874@nus.edu.sg |
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20.I would like to show my sincere appreciation to my TA, Chen Xin, who has helped me during the course of this research. |
| J Vanitha sci10949@nus.edu.sg sci10949@nus.edu.sg |
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21.I would like to thank the coordinators, lecturers and Teaching Assistants of LSM 2104 for giving me the opportunity to have hands-on experience in manipulating IT resources to search for, analyse and interprete information from the internet. Doing this mini project has been a very challenging, interesting and fruitful experience. |
| Karmeswaree Govinthan Naiken sci11150@nus.edu.sg sci11150@nus.edu.sg |
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22.I would really like to thank A/P Tan Tin Wee for his detail explanations on what and how to carried out this project and increased my interest in Bioinformatics and Biocomputing. Furthermore, Miss Cao Zhiwei and other TAs had be very helpful and patient with me during the course of doing this mini project. |
| Lee XueFen sci10500@nus.edu.sg sci10500@nus.edu.sg |
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23.I would like to thank Prof Tan Tin Wee for his encouragement and guidance in this mini project as well as TA Cao Zhiwei for her patience and guidance in clearing my doubts and in making this mini project possible |
| Leow Ying Ling sci10073@nus.edu.sg sci10073@nus.edu.sg |
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24.Many thanks to the course lecturers and TAs, especially Ms Cao Zhiwei for her utmost patience and approachability. |
| Ler Chiew Lei, Stella sci10896@nus.edu.sg sci10896@nus.edu.sg |
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25.Dr. Tan Tin Wee.s contributions to the mini-project were invaluable for offering us such a wonderful opportunity and providing us all needed information and help to explore in this mini research process. I would also like to thank the two teaching assistants of Group C, Ms. Cao Zhiwei and Mr. Lee Teck Kwong, Bernett, for their patient guidance. I appreciate any further opportunity of involvement in such kind of research project. |
| Li Ling sci11167@nus.edu.sg sci11167@nus.edu.sg |
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26.I would like to sincerely thank my TA, Bernett Tan for his guidance and patience. |
| LIEW LAILING sci10430@nus.edu.sg sci10430@nus.edu.sg |
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27.I would like to express my heartfelt thanks to A/P Tan Tin Wee for his dedication and kindness in offering help always. The explanation which had given inndeed enlightened me on various aspects for this project. Besides, I would sincerely like to thank Ms Cao Zhiwei and Mr Bernett Lee for being so dedicated, patient and responsible TAs. |
| Lim Chin Sim sci11298@nus.edu.sg sci11298@nus.edu.sg |
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28.I would like to thank A/P Tan Tin Wee and Ms Cao Zhiwei for their guidance in this project. |
| Lim Lishan, Clairice sci10006@nus.edu.sg sci10006@nus.edu.sg |
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29.I would to express my gratitude to my tutors Mr Bernett Lee and Miss Cao Zhiwei for spending great effort in helping us understand the workings of bioinformatics. |
| Lim Mei Yin sci10695@nus.edu.sg sci10695@nus.edu.sg |
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30.I would like to thank Mr Bernett Lee for his excellent explanations and his patient guidance, as well as Ms Cao Zhiwei for her helpful tutorials. |
| Lin Simin sci10800@nus.edu.sg sci10800@nus.edu.sg |
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31.The philosophical advice given by Professor Tan Tin Wee and the practical assistance of Cao Zhiwei, Yien Yee Yvette, Shruti Kapoor, Kuah Li Fang and Chak Li Ling are gratefully acknowledged. This project was supported by the Bioinformatics Centre, National University of Singapore, and done exclusively on the GNU/Linux platform. |
| Lin Yangchen sci10216@nus.edu.sg sci10216@nus.edu.sg |
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32.I would like to mention that without my TA, Lee Teck Kwong Bernett's dedication and patience, I would not have gone past the first step and this project would not have been completed |
| Lin Zhangli sci10363@nus.edu.sg sci10363@nus.edu.sg |
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33.I would like to express my appreciation to Prof Tan Tin wee for his guidance along the path leading to the completion of the Miniproject. I would also like to thank my TA Ms cao zi wei for being helpful and understanding. I would like to express my appreciation to Lim Sze Sze and Jacquelin Lua for being so helpful |
| Lok Ley Woon sci11226@nus.edu.sg sci11226@nus.edu.sg |
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34.I would like to thank A/P Tan Tin Wee for his dedication and passion to help students in understanding the concepts of Bioinformatics. Besides that , I
would also like to thank Ms Cao Zhiwei and Mr Bernett Lee for being there to answer our questions and queries and most of all for being our TA. | |
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Alex Loke Wan Leak sci11266@nus.edu.sg
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35.I would like to specially thank my LSM2104 lab partner Clement for helping me understand the meaning of each practical and tutorial exercise, for being nice, and for asking so many interesting questions. My thanks also go to my helpful, patient and extraordinarily computer-savvy TAs Justin and Bhuvana, who get bombarded with many questions from everybody during practicals, as well as to Prof Tan for assigning this challenging project. To Liwen, Simin, Clairice, Songyu, =) here goes another project and a significant amount of sleep. May we all live long and prosper. |
| Low Soo Mei sci10424@nus.edu.sg sci10424@nus.edu.sg |
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36. I would sincerely like to thank A/P Tan Tin Wee for his time and kind explanation that had enlightened me on various aspects of this project, as well as Justin and the other TAs for being a patient and responsible |
| Lum Kinn Gerard Brandon sci10113nus.edu.sg sci10113nus.edu.sg |
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37. sincerely thank Prof Tan Tin Wee and my TA, Cao Zhi Wei for their most patient help.I wasn't sure what to do when I chanced upon the Csp protein in the wee hours of the morning. In the short amount of time before lecture on the 10th Mar 2003, After speaking to Prof Tan, most things came to light. "We are at the frontline of genomic annotation." - a quote from Prof Tan. |
| Lye Yu Min sci10220@nus.edu.sg sci10220@nus.edu.sg |
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38.Many THANKS to the teaching assistants Justin and Bhuvaneswari for their patience and help despite being consistently pestered by us. =) |
| Ng Hui Ling sci10754@nus.edu.sg sci10754@nus.edu.sg |
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39.I would like to thank A/P Tan Tin Wee for giving us this 'hands-on' project. In addition, I would also like to thank Bhuvana and Justin for being a responsible TA |
| Ng Shilen sci00212@.nus.edu.sg sci00212@.nus.edu.sg |
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40.I would like to thank Prof. Tan Tin Wee, Justin and Bhuvana for their kind assistance and advice. |
| Teclise Ng sci10003@nus.edu.sg sci10003@nus.edu.sg |
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41.I Would like to convey my sincere thanks to A/P Tan Tin Wee for his guidance in this project. Special Thanks goes to my TAs, Bhuvana and Justin for their relentless efforts to help the students in need, like me and my other labmates who had collaborated together to tackle this project. Without their presence, day in and day out, this project would have been very difficult for us. And not forgetting my lab mates, Randy, Nurashikin and Noraisha for putting in the maximum effort that they can to excel in this project and at the same time making the whole learning atmosphere fun for me. THANKS! |
| Nor Ashraf B Samsudin sci10126@nus.edu.sg sci10126@nus.edu.sg |
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42.I would sincerely like to thank A/P Tan Tin Wee for his kind explanation as well as care and concern towards his students throughout this module. My appreciation also goes out to the patient and dedicated TAs, Justin and Bhuvana, who have greatly helped me in this project. I would also like to thank my peers; Nurashikin Hassan, Nor Ashraf Samsudin and Randy Lee, who have worked very well in collaboration for this project. |
| Noraisha Hamzah sci00808@nus.edu.sg sci00808@nus.edu.sg |
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43.Special thanks to Noraisha Hamzah, NorAshraf Samsudin and Randy Lee for their dedicated contributions as well as their time and effort throughout the making of this project. Also heartfelt appreciation for the two TAs, Bhuvana and Justin who had assisted me and gave considerable knowledge in enlightening me with the project. Last but not least, to A/P Tan Tin Wee for his vision and insights that allowed us the opportunity to embark on this project |
| Nur'ashikin Bte Hassan sci00415@nus.edu.sg sci00415@nus.edu.sg |
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44.I would like to thank Dr Tan Tin Wee and Mr Justin Choo for their kind and patient guidance in the course of doing this project |
| Ong Hui Wen sci10819@nus.edu.sg sci10819@nus.edu.sg |
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45.Hereby I would like to thanks A/P Tan Tin Wee sincerely for his interesting and creative idea to open this project. I would like to thanks TA Chen Xin and Kong Lesheng for their patient demonstrations and detailed instructions to guide me to do this project. |
| Rao Feng sci11152@nus.edu.sg sci11152@nus.edu.sg |
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46.I would sincerely like to thank A/P Tan Tin Wee for his explanation on this project. In addition I would also like to thank both my TAs from the 'e' practical group for their attention too. Because of all these help, I am able to finish my project on time and is able to understand the various aspects of bioinformatics related to the project. |
| Seah Ai Hwee sci10644@nus.edu.sg sci10644@nus.edu.sg |
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47.I would like to thank A/P Tan Tin Wee and TAs Chen Xin and Kong Lesheng for their guidance and assistance in course of this project. To fellow students of Group E, thanks for the times of discussion and clarifications. Many thanks also to computer-savvy friends who have help in trouble-shooting problems faced in creating the web-site.This project would not have been possible without all of you. Thanks! |
| Seow Josefina sci10955@nus.edu.sg sci10955@nus.edu.sg |
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48.I would like to thank the department, A/P Tan Tin Wee, the teaching assistants at the laboratory and my friends.This project however, owes its existence to the following non-bioinformatics tools as well |
| Shruti Kapoor sci10943@nus.edu.sg sci10943@nus.edu.sg |
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49.I hereby wanted to thanks my Teaching assistants, Chen Xin and Kong Lesheng for their patient assistances and guidances in my doing of this project. |
| Tan Siew Hoon sci10108@nus.edu.sg sci10108@nus.edu.sg |
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50.I would like to thank the following for their contributions:NCBI-http://www.ncbi.nlm.nih.gov,Swiss-Prot-http://tw.expasy.org/sprot/sprot-top.htmlKEGG-http://www.genome.ad.jp/kegg/kegg2.html],ClustaW-http://clustalw.genome.ad.jp,NUS Bioinformatics centre-http://everest.bic.nus.edu.sg,Mr Chen Xin for his dedicated help in practicals and tutorials,Mr Justion Choo for his elaborate effort to help students in the project. |
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51.I would like to take this opportunity to thank A/P Tan Tin Wee for giving us such an interesting project to accomplish and willing to sacrifice his precious time to enligthen us on various aspects of this project, as well as my two dedicated and responsible teaching assistants Cao Zhiwei and Bernett Lee Teck Kwong for clearing all the doubts that I had in the procedure of doing this memorable project. Last of all, I want to thanks all my peers that had helped me in one way or another. |
| Teo Yifen sci10719@nus.edu.sg sci10719@nus.edu.sg |
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52.I would like to convey my deepest thank and admiration for Asst. Prof. Tan Tin Wee for his help and his lectures which had not only aided in this project, but also created a sense of appreciation by the students.. I would also like to thank my two hardworking and dedicated tutors, Mr. Justin and Miss Chao Zhiwei for their time and patience in helping me make this mini-project a successful one. |
| Victor Muthu sci11190@nus.edu.sg sci11190@nus.edu.sg |
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53.thanks very much to my respectable TA Miss Cao Zhiwei and Dear Dr. Tan |
| Wang Guanyu sci11102@nus.edu.sg sci11102@nus.edu.sg |
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54.I wish to thank A/P Tan Tin Wee for his clear explanation and patience, and most importantly, initiating the idea of this project which was different from the traditional continuous assessments. Special thanks also go to Mr Lee Teck Kwong Bernett and Ms Cao Zhiwei for the great help and denoting their time to repeat the explanations and providing suggestions without losing any patience. |
| Wang Songyu sci10522@nus.edu.sg sci10522@nus.edu.sg |
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55.Thanks to my lecturer, Mr. Tan Tin Wee and my tutor, Mr. Bernett Lee Teck Kwong for providing guidance while I am doing this project and for being helpful when I have querries. |
| Wong Chew Hooi sci11276@nus.edu.sg sci11276@nus.edu.sg |
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56.I would like to thank Prof Tan Tin Wee for his lectures and explanations on Sequence Comparison and Algorithms, Sequence Alignments, Introduction to PAM, BLOSUM, FASTA and BLAST Programs and my teaching assistants Bernett Lee and Cao Zhiwei for their kind assistance. |
| Wong Yueat Tin sci11007@nus.edu.sg sci11007@nus.edu.sg |
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57.I would like to thank A/P Tan Tin Wee for offering such a research opportunity and guidance in the whole project. I also thank Cao Zhiwei and Lee Teck Kwong, Bernett for wonderful discussions and help for this project. |
| Xie Huangming sci11153@nus.edu.sg sci11153@nus.edu.sg |
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58.I'd like to thank my TA, Bernett Lee, for his invaluable guidance and patience! |
| Xu Dingyue sci10725@nus.edu.sg sci10725@nus.edu.sg |
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59.I would like to thank A/P Tan Tin Wee for providing this opportunity to undertake this project, as well as providing invaluable information throughout its duration. Also, credits must be given to the lab TAs, Bernett Lee and Cao Zhiwei for their patient guidance and for resolving my numerous queries |
| Yeo Loon Chew eng90323@nus.edu.sg eng90323@nus.edu.sg |
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60.I would like to thank A/Prof Tan Tin Wee for his interesting and informative lectures and kind guidance, teaching assistants, Mr. Justine Choo and Ms. Narasa Ramaswamy Bhuvaneswari for their patience, assistance and guidance throughout the entire duration of this project. |
| Lee Swee Kok, Roy sci10033@nus.edu.sg |
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61.I would like to send my sincere thanks to both of my TAs-Mr. Justin and Ms Bhuvana. Thanks for their enthusiasm in helping me understand issues behind the project. With their guidance, I finished my project and gained experiences and skills which are not only necessary for the course but also for my knowledge. |
| Nguyen Khanh Linh sci11339@nus.edu.sg |
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62.I would like to express my sincerely gratitude to A/P Tan Tin Wee for his guidance and enlightenment in the making of this web page. In addition, I would like to thank Ms Cao Zhiwei for inspiring me to think and adopt creative ideas pertaining to this topic. Indeed, I would also like to thank Mr Lee Teck Kwong, Bernett, for his advice regarding academic and technical issues that I have encountered. Finally, I would like to thank the creators of the bioinformatics software whose contributions have made this project a physical reality |
| Yeo Yee sci10023@nus.edu.sg sci10023@nus.edu.sg |
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63.I would like to thank A/P Tan Tin Wee for designing this project, allowing me to have the opportunity to learn more about applications of bioinformatics, as well as his lively lectures on this topic. Special thanks go to Ms. Cao Zhiwei and Mr. Bernett Lee for their patient guidance throughout the course of this project |
| Zheng Simin sci10472@nus.edu.sg sci10472@nus.edu.sg |