National University of Singapore, BioInformatics Center -> Local Databases/Services
DataDescriptionSourceOrganisationDownload LocationOperational/ Archived DataFrequency of UpdateLevel of GuaranteeUsage Restrictions
AllergenCollection allergenic protein records and analytical tools that comply with the Allergen Committee of the International Union of Immunological Societies (IUIS), Food and Agriculture Organisation (FAO) and World Health Organisation (WHO) I2RLinkOperationalNANANone
ANTIMICANTIMIC provides a comprehensive repository of known and putative antimicrobial peptides (AMPs) along with the relevant tools so as to facilitate efficient extraction of data and its analysis at molecular level, as well as the search for new AMPs.  I2RLinkOperationalNANANone
Burkholderia pseudomallei Genome Database  NUS-BICLinkOperationalNANANone
Burkholderia pseudomallei Genome Database  NUS-BICLinkOperationalNANANone
Burkholderia pseudomallei Genome Database  NUS-BICLinkOperationalNANANone
CasBaseCasbase is an online relational database containing an array of biological data on caspases and their substrates. This database consists of two distinct sets of entries for caspases and their substrates collected from publicly available databases and published literature. Entries are annotated with links to other databases (e.g. Uniprot, PubMed, Interpro, PDB) as well as proprietary data such as substrate cleavage sites and cleavage consequences NUS-BICLinkOperationalNANANone
Computed ligand binding energy database  NUS-CSCLinkOperationalNANANone
Drosophila melanogaster Exon DatabaseDatabase that contains information on Drosophila melanogaster exons presented in a splicing graph form NUS-BICLinkOperationalNANANone
Drug ADME associated protein database  NUS-CSCLinkOperationalNANANone
Drug adverse reaction target database  NUS-CSCLinkOperationalNANANone
ExIntA database to help to identify common evolutionary patterns in higher eukaryotic genes for the study of intron loss/gain, sliding, splicing, retroposition, recombination, intron/exon duplication, etc NTU-NUS-BICLinkOperationalNANANone
Fish pathogen databasePathogenesis of bacteria (such as Aeromonas hydrophila, Edwardsiella tarda and Vibrio species) and the identification of virulence determinants using fish as a model system for the past six years.  NUS-DBSLinkOperationalNANANone
HCC-M databaseHCC-M database 2D Gel and MALDI Proteomic analysis data NUS-DBSLinkOperationalNANANone
HCC-M database (2nd Link)HCC-M database 2D Gel and MALDI Proteomic analysis data NUS-DBSLinkOperationalNANANone
Hepatitis B registry system  NUS-BICLinkUnder MaintenanceNANANone
IE-Kb Intron-Exon Knowledge BaseIntron-Exon Knowledge Base NTU-NUS-BICLinkOperationalNANANone
Kinetic data of biomolecular interactions databaseKinetic Data of Bio-molecular Interaction (KDBI) is a collection of experimentally determined kinetic data of protein-protein, protein-RNA, protein-DNA, protein-ligand, RNA-ligand, DNA-ligandbinding or reaction events described in the literature NUS-CSCLinkOperationalNANANone
MHCPThe MHC-Peptide Interaction Database (MHCP) is a curated MySQL database for sequence-structure-function information on MHC-Peptide interactions. It contains all structures of Major Histocompability proteins containing bound peptides, with emphasis on the structural characterization of these complexes. NTU-NUS-BICLinkOperationalNANANone
MIDBMIDB is a database containing all discordant intron positions in homologous genes (MIDB for Mismatched Intron Database) using ExInt, Discordant intron positions are those that are either closely located in homologous genes (within a window of 10 residues) or an intron position that is present in one gene but not in any of its homologs. NTU-NUS-BICLinkOperationalNANANone
MolluskIntegrated database focusing on the conotoxin sequence information I2RLinkOperationalNANANone
MPID-TThe MHC-Peptide Interaction Database - T-Cell Receptor (MPID-T) is a database for sequence-structure-function information on TCR-peptide-MHC interactions. It contains all structures of TCR-pMHC and pMHC complexes, with emphasis on the structural characterization of these complexes NUS-BICLinkOperationalNANANone
Scorpion Toxin DatabaseA molecular database of scorpion toxins I2RLinkOperationalNANANone
SEGEA database on 'intron less/single exonic' genes from eukaryotes NTU-NUS-BICLinkOperationalNANANone
Snake Venom Neurotoxin  I2R-NUS-BCHLinkOperationalNANANone
Snake Venom PLA2Specialised database for molecular analysis of snake venom PLA2s, intended to facilitate the design of experimental protocols I2RLinkOperationalNANANone
SPdbSignal Peptide Database (SPdb) is a database that contains information on signal peptide. The database contains experimentally and non-experimental sequences. This database also contains other information such as amino acid composition, hydropathy plot and more NUS-BICLinkOperationalNANANone
SpliceratorIntegrated Human alternative RNA splicing Database NUS-DBSLinkOperationalNANANone
Therapeutic target databaseA database to provide information about the known and explored therapeutic protein and nucleic acid targets, the targeted disease, pathway information and the corresponding drugs/ligands directed at each of these targets NUS-CSCLinkOperationalNANANone
XProXpro is a relational database that contains all the eukaryotic protein-encoding DNA sequences in GenBank. It provides detailed and comprehensive features about both the intron containing and the intron-less genes.The current release of Xpro (v.1.2, Jan 2004) is MySQL (v 3.23.39) relational database and contains information up to date with GenBank release 139.  NUS-BICLinkOperationalNANANone
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Last modified on 21st Sept, 2005 by BioInformatics Center